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Search: Posts Made By: mads b
Forum: General 03-15-2010, 05:18 AM
Replies: 3
Views: 2,193
Posted By mads b
We have been using a std 32bit desktop with 4gb...

We have been using a std 32bit desktop with 4gb RAM and open source software for bacterial genomes and Illumina reads. Itīs doable but some steps are 4-6 hours.

My current solution is a 64bit 2X...
Forum: Bioinformatics 09-30-2009, 06:42 AM
Replies: 14
Views: 11,072
Posted By mads b
and by the way....I am running windows 7. Donīt...

and by the way....I am running windows 7. Donīt know whether it makes any difference....
Forum: Bioinformatics 09-30-2009, 06:41 AM
Replies: 14
Views: 11,072
Posted By mads b
I am in general very satisfied with the program ...

I am in general very satisfied with the program

I am at present analyzing bacterial genomes of 2-4 megabases sequenced as 38 bp single illumina reads (an aspergillus genome of 35 megabases is in...
Forum: Bioinformatics 09-30-2009, 03:59 AM
Replies: 14
Views: 11,072
Posted By mads b
We run standard Illumina pipeline on 2x Quad...

We run standard Illumina pipeline on
2x Quad core Xeon 5550 32 GB ram

Software: CLCbio Genomic Workbench.

Configuration allow at 7 parallel de novo or reference assemblies to be finished in...
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