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Search: Posts Made By: sachin
Forum: Bioinformatics 01-20-2017, 02:25 AM
Replies: 13
Views: 7,866
Posted By sachin
Hi, I got the same error. Resolved, problem was...

Hi,
I got the same error. Resolved, problem was with the bam file.

Sachin A
Forum: Bioinformatics 05-19-2015, 11:15 PM
Replies: 4
Views: 2,564
Posted By sachin
Hi Amit, For the NIPT projects, you can use...

Hi Amit,
For the NIPT projects, you can use trial version ofSoftgenetic's Sensitive Aneuploidy Detection Tool (SAD) for the analysis (NCVs based), but for this tool you will require minimum 32...
Forum: General 01-25-2015, 09:02 AM
Replies: 3
Views: 1,618
Posted By sachin
we have only case RNA-Seq data from Ion proton...

we have only case RNA-Seq data from Ion proton (not having control data set), please suggest how to do expressoin study..
Forum: Bioinformatics 12-18-2014, 11:11 PM
Replies: 4
Views: 5,033
Posted By sachin
Hi, Have you detected fusions using Exome tumor...

Hi,
Have you detected fusions using Exome tumor data?
Thanks,
Sachin
Forum: Bioinformatics 04-03-2014, 11:56 PM
Replies: 0
Views: 1,247
Posted By sachin
Output of Cassandra annotation program

Hello All,


I am working on Human exome project, where i would like to annotate variant file(VCF).

For this purpose i am using Cassandra, i have downloaded all required files and dependencies...
Forum: Bioinformatics 02-18-2014, 02:35 AM
Replies: 4
Views: 2,564
Posted By sachin
How to calculate Z-score for aneuploidy?

Hello everyone,

I am working on down syndrome. I have referred some papers for NIPT (Noninvasive Prenatal Testing) in which they have detect trisomy using the z-score method.

So is any easy...
Forum: Bioinformatics 01-06-2014, 01:55 AM
Replies: 7
Views: 4,628
Posted By sachin
Thank you vivek..I also encounter this...

Thank you vivek..I also encounter this problem..solved by your "60 bases per line in fasta input files" post
Forum: Bioinformatics 01-06-2014, 01:15 AM
Replies: 25
Views: 21,428
Posted By sachin
thank you shriram..issue resolved export...

thank you shriram..issue resolved

export PATH=/home/ionadmin/root/bin/:$PATH
export ROOTSYS=/home/ionadmin/root/
export LD_LIBRARY_PATH=/home/ionadmin/root/lib/
Forum: Bioinformatics 12-31-2013, 03:24 AM
Replies: 25
Views: 21,428
Posted By sachin
Hello Shriram, I got the same error like "In...

Hello Shriram,

I got the same error like "In file included from cnvnator.cpp:8:
HisMaker.hh:11:20: error: TFrame.h: No such file or directory"

I have give following path:
export...
Showing results 1 to 9 of 9

 


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