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Forum: Bioinformatics 02-06-2014, 10:25 AM
Replies: 2
Views: 1,472
Posted By lan_ub
Question How short an Illumina read needs to be discard?

I'm working on ancient DNA mitochondrial genome mapping. We extracted genomic DNA from "fossil" bones. Then we did paired-end Illumina Hiseq shotgun sequencing using single stranded library. (Based...
Forum: Bioinformatics 06-11-2013, 09:45 AM
Replies: 0
Views: 1,276
Posted By lan_ub
Smile How to complete incomplete gene seqs using short read blast on NCBI

Here is my question:

I have a bunch of incomplete genes (cds only). Those gene sequences were obtained by mapping HiSeq reads to a reference genome. Now we want to mine from more short illumina...
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