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Forum: Events / Conferences 02-16-2013, 07:01 AM
Replies: 0
Views: 1,349
Posted By paulk
Agbt 2013

Since the 2013 AGBT agenda is out (http://agbt.org/agenda.html), does anyone have opinions of what the most significant talks are going to be?

Oxford Nanopore was the big jaw-dropper last year...
Forum: The Pipeline 02-15-2013, 05:47 PM
Replies: 80
Views: 202,549
Posted By paulk
Not really; I'd love to be able to quickly map...

Not really; I'd love to be able to quickly map out cancer genome rearrangements and a 4% error rate wouldn't bother me for that purpose.

I wonder what updates will come out next week at AGBT...
Forum: Bioinformatics 02-15-2013, 05:35 PM
Replies: 3
Views: 2,558
Posted By paulk
I encountered something like this last year,...

I encountered something like this last year, where I was getting transcripts flagged as HIDATA in Cufflinks output.

You might try increasing the --max-bundle-frags setting in from its default...
Forum: Literature Watch 11-26-2012, 12:08 PM
Replies: 2
Views: 1,140
Posted By paulk
Hello Bernado, Did you manage to obtain a copy...

Hello Bernado,
Did you manage to obtain a copy of the paper, if not, please let me know.
Paul


Paul Krzyzanowski, PhD
Postdoctoral Fellow

Ontario Institute for Cancer Research
Toronto,...
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