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Forum: Bioinformatics 08-07-2012, 07:02 AM
Replies: 14
Views: 3,635
Posted By senkewiczs
Thanks areyes! Helpful as always!

Thanks areyes! Helpful as always!
Forum: Bioinformatics 08-06-2012, 07:27 AM
Replies: 14
Views: 3,635
Posted By senkewiczs
Hi areyes, I'm also getting an error...

Hi areyes,

I'm also getting an error message when trying to use the dexseq_prepare_annotation.py. I'm trying to use it on the gtf file for drosophila from...
Forum: Bioinformatics 07-18-2012, 08:40 AM
Replies: 29
Views: 5,498
Posted By senkewiczs
Hi Alejandro, Yes, I was getting 'xxxx...

Hi Alejandro,

Yes, I was getting 'xxxx number of reads processed.'

Here is the head of human1_sorted.sam:...
Forum: Bioinformatics 07-17-2012, 08:33 AM
Replies: 29
Views: 5,498
Posted By senkewiczs
Problem working with DEXSeq package

Hi I'm new to SEQanswers, and fairly new to bioinformatics, but I'm trying to work with the python scripts for the DEXSeq R package through Bioconductor.

We have paired-end data from human...
Forum: Bioinformatics 07-17-2012, 08:01 AM
Replies: 0
Views: 1,029
Posted By senkewiczs
Problem working with DEXSeq package

Hi I'm new to SEQanswers, and fairly new to bioinformatics, but I'm trying to work with the python scripts for the DEXSeq R package through Bioconductor.

We have paired-end data from human...
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