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Search: Posts Made By: sydghyyh14
Forum: Bioinformatics 03-30-2016, 08:28 PM
Replies: 4
Views: 1,368
Posted By sydghyyh14
I do not know how to modify Breakdancer source. ...

I do not know how to modify Breakdancer source.

And I found "Performing Test CXX11_FLAG0 - Failed" after cmake as following:
Score floating point type: double
-- Performing Test CXX11_FLAG0
--...
Forum: Bioinformatics 03-30-2016, 09:59 AM
Replies: 4
Views: 1,368
Posted By sydghyyh14
My OS is Red Hat 4.4.5-6 ...

My OS is Red Hat 4.4.5-6
zlib-1.2.3-27.el6.x86_64
zlib-devel-1.2.3-27.el6.x86_64
Forum: Bioinformatics 03-30-2016, 09:00 AM
Replies: 4
Views: 1,368
Posted By sydghyyh14
breakdancer install error

I want to install BreakDancer-1.3.6.
After make, I got error as following, who can tell me how to fix it?
[ 1%] Creating directories for 'boost-libs'
[ 3%] Performing download step (verify and...
Forum: Bioinformatics 04-14-2013, 12:18 AM
Replies: 0
Views: 1,500
Posted By sydghyyh14
iprscan eror message

I tried to run iprscan localy. But I got error message like this afer my configure it. Who can tell me how to deal with it?

Thank you very much !

./iprscan -cli -i test.seq -iprlookup –goterms...
Forum: Bioinformatics 07-10-2012, 10:59 PM
Replies: 0
Views: 1,277
Posted By sydghyyh14
Error message for MACS

I tried to run MACS, but I got error message like this,who can tell me how to fix it?

Traceback (most recent call last):
File "/share/biosoft/bin/macs14", line 320, in <module>
main()
...
Forum: Bioinformatics 09-20-2011, 10:30 AM
Replies: 3
Views: 2,393
Posted By sydghyyh14
RepeatMasker output

I am interested in screening human genome sequences with RepeatMasker.

But I got some results like this in the .out file:

532 22.4 8.4 5.4 chr22 24022607 24022809 (27281757) + LTR87
...
Forum: Introductions 05-18-2010, 12:05 AM
Replies: 0
Views: 996
Posted By sydghyyh14
Hi all

I come from China, I am interest in RNA-seq and CHIP-seq, I look forward to learn from everyone.
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