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Forum: Bioinformatics 10-27-2020, 10:53 AM
Replies: 1
Views: 671
Posted By jleehan
Obtaining gene sets for GSEA

Hi All,

I work with Bacillus subtilis and I want to perform some GSEA on an RNA-seq data set. Looking at the literature, I've seen that it is very much possible to do this. I know that gene sets...
Forum: Bioinformatics 01-29-2019, 08:06 AM
Replies: 2
Views: 1,630
Posted By jleehan
Thank you very much for your recommendation, I'll...

Thank you very much for your recommendation, I'll be sure to check it out!
Forum: Bioinformatics 01-28-2019, 12:44 PM
Replies: 2
Views: 1,630
Posted By jleehan
Detecting Known, Low Frequency SNPs in evolving bacterial communities

Hi all,

I'm using NGS data to observe how a community of congenic bacteria evolve over time. Basically, I'm starting by inputting several different alleles of one gene into the same medium and...
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