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Forum: Bioinformatics 01-23-2020, 03:00 PM
Replies: 3
Views: 1,160
Posted By ghd21
Thanks for your reply! Ambiguous reads are just...

Thanks for your reply! Ambiguous reads are just assigned to the first best site so I don't think that is the reason, it appears that not all the reads are attempting to be mapped? When I change the...
Forum: Bioinformatics 01-22-2020, 07:42 PM
Replies: 3
Views: 1,160
Posted By ghd21
bbsplit not using all reads in library

I have RNA-seq files which I am wanting to split based on mapping to reference sequences. I am using bbsplit to map to the sequences and output separate mapping files however I noticed that not all...
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