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Forum: Bioinformatics 04-24-2012, 04:09 AM
Replies: 2
Views: 1,332
Posted By stuka
If you have a cluster you might want to look into...

If you have a cluster you might want to look into the scatter/gather parallelism. Basically you do many GATK callings at once spread out around the cluster, with each job just doing a portion of the...
Forum: Bioinformatics 11-29-2011, 10:03 AM
Replies: 4
Views: 1,936
Posted By stuka
I've developed a naive tool to brute force...

I've developed a naive tool to brute force compare to do some basic removal using hadoop

https://github.com/oklasoft/b-tangs
Forum: Bioinformatics 06-29-2009, 11:36 AM
Replies: 0
Views: 1,011
Posted By stuka
General Analysis Server

I am looking to get a general purpose analysis machine for our data, storage is not a concern it is taken care of, which should be next biggest thing to throw money at? More CPU speed, more cores,...
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