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Forum: Bioinformatics 01-31-2016, 10:55 AM
Replies: 2
Views: 900
Posted By kostask
Thank you westerman I saw exactly the flags...

Thank you westerman

I saw exactly the flags and the corresponding reads for each one.

Wouid it be correct if I wanted to extract reads with certain flags (specifically 67, 131, 115 and 179) to...
Forum: Bioinformatics 01-26-2016, 04:02 PM
Replies: 2
Views: 900
Posted By kostask
extract_only_concordant_paired_reads_from_bam_file

Hi everyone,

I am trying to extract only concordant paired reads from my bam file using a command that I found in posts with similar subject:

https://www.biostars.org/p/95929/
...
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