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Forum: Bioinformatics 07-21-2010, 01:20 PM
Replies: 0
Views: 2,232
Posted By jwhittall
Reciprocal Blast With Multiple Contigs Per Gene

Dear SeqAnswers,

I'm assembling a transcriptome de novo and trying to use reciprocal blast to increase my confidence in contig identification. Velvet/Oases produces multiple contigs that blast to...
Forum: Illumina/Solexa 08-20-2009, 10:13 AM
Replies: 1
Views: 1,914
Posted By jwhittall
Tom, No answer here, but I'm in a similar...


No answer here, but I'm in a similar boat and was waiting to see if anyone had an answer to your question. I've got a mustard that is 85-90% similar in nucleotide sequences of coding regions...
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