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Forum: Industry Jobs! 04-28-2017, 07:19 PM
Replies: 0
Views: 696
Posted By Genohub
VP of Science and Operations

Genohub is a small startup with a big mission. Thousands of scientists use our online platform to reliably conduct projects with external labs. We are looking for a motivated and self-driven...
Forum: General 04-09-2017, 03:01 PM
Replies: 1
Views: 873
Posted By Genohub
Beginner's Handbook to Next Generation Sequencing

Despite its popularity, understanding how NGS works usually requires translating technology jargon and stitching together tidbits from presentations or discussions with colleagues. This handbook is...
Forum: Illumina/Solexa 01-09-2017, 09:10 PM
Replies: 113
Views: 18,084
Posted By Genohub
Summary of NovaSeq Specs

Biggest change is NovaSeq's reduction in space between nanowells, designed to increase cluster density and data output (up to 2-3x more per flow cell than HiSeq X). Notable is the omission of...
Forum: Vendor Forum 12-29-2016, 07:19 PM
Replies: 0
Views: 1,212
Posted By Genohub
Genohub Rolls out Unlimited NGS Data Storage and Transfer

Genohub (http://www.genohub.com), the leading platform for finding and ordering sequencing-related services, announced today the release of a full end-to-end solution for NGS data management, Genohub...
Forum: Service Providers 07-23-2016, 12:26 PM
Replies: 0
Views: 1,487
Posted By Genohub
Case for why Genohub should be used for getting quotes and handling all your NGS work

We describe here: https://genohub.com/ngs-researchers/ how with a single relationship you have access to the best NGS providers, the latest instrument technology and our experienced scientific staff....
Forum: Sample Prep / Library Generation 07-19-2016, 06:31 PM
Replies: 9
Views: 1,613
Posted By Genohub
You can do a mRNA-seq library prep search on...

You can do a mRNA-seq library prep search on Genohub.com: https://genohub.com/#q=a9ce1f402a. Costs (including QC) start at $165/sample (no sample number minimums).

Each service comes with a...
Forum: Vendor Forum 07-19-2016, 05:48 PM
Replies: 0
Views: 1,058
Posted By Genohub
Leading NGS Matching Engine Just Got Better

We've completely redesigned Genohub's interface making it easier and faster to find sequencing services.

Highlights includes:

1- New instrument and library preparation kit filters
2-...
Forum: Service Providers 03-17-2016, 07:58 PM
Replies: 1
Views: 1,767
Posted By Genohub
Small RNA sequencing services start at...

Small RNA sequencing services start at $225/sample on Genohub (library prep and 2-3M 1x50 reads/sample): https://genohub.com/shop-by-next-gen-sequencing-project/?refid=mt3789#query=fa0cee9f07. Prices...
Forum: General 03-15-2016, 06:39 PM
Replies: 3
Views: 732
Posted By Genohub
You can start here:...

You can start here: https://genohub.com/shop-by-next-gen-sequencing-project/?refid=mt3789#query=36eff1b769.

The filters are set at 25, 16S samples with a minimum of 100K reads/sample and minimum...
Forum: Illumina/Solexa 03-06-2016, 06:00 PM
Replies: 15
Views: 4,668
Posted By Genohub
Highlights of current HiSeq 3000/4000...

Highlights of current HiSeq 3000/4000 limitations: https://genohub.com/services/sequencing/illumina-hiseq-3000-4000/
Forum: General 10-18-2015, 05:44 AM
Replies: 51
Sticky: NGS Blogs
Views: 48,173
Posted By Genohub
A good place to start are the NGS guides on...

A good place to start are the NGS guides on Genohub:

Designing Your Sequencing Runs (https://genohub.com/next-generation-sequencing-guide/)
Sequencing Coverage Guide...
Forum: Genomic Resequencing 09-23-2015, 08:42 PM
Replies: 0
Views: 1,571
Posted By Genohub
Key Considerations for Whole Exome Sequencing

http://blog.genohub.com/key-considerations-for-whole-exome-sequencing/


Should I choose Whole Genome Sequencing or Whole Exome Sequencing
How to choose a Exome Sequencing Kit for capture and...
Forum: Bioinformatics 06-03-2015, 09:03 PM
Replies: 0
Views: 670
Posted By Genohub
Benchmarking DGE Tools as a function of Replicates

Authors recommend at least 6 replicates/condition in an RNA-seq experiment, and up to 12 in studies where identifying the majority of differentially expressed genes is critical. They recommend...
Forum: Bioinformatics 05-12-2015, 07:42 PM
Replies: 1
Views: 1,000
Posted By Genohub
Coverage and Read Depth Recommendations by Sequencing Application

Genohub is in the process of developing an evolving coverage and read depth guide: https://genohub.com/recommended-sequencing-coverage-by-application/ based on references in the field. We'd like to...
Forum: Illumina/Solexa 05-08-2015, 05:02 AM
Replies: 10
Views: 2,995
Posted By Genohub
Would you be open to listing your HiSeq 4000 on...

Would you be open to listing your HiSeq 4000 on Genohub.com (http://www.genohub.com)? There are many researchers hoping to get access. Are access to flow cells still a limiting factor?
Forum: RNA Sequencing 05-06-2015, 08:35 PM
Replies: 0
Views: 704
Posted By Genohub
48 Replicate RNA-Seq Study Points to Requirements for DGE

Unfortunately, we estimate ~80% of those doing DGE use only 3 replicates. At least 6 replicates should be used to account for variability, bad replicates and dropouts:...
Forum: RNA Sequencing 04-22-2015, 08:54 PM
Replies: 5
Views: 1,183
Posted By Genohub
Coverage and Read Depth by Sequencing Application...

Coverage and Read Depth by Sequencing Application (https://genohub.com/recommended-sequencing-coverage-by-application/) - a new guide
Forum: General 03-24-2015, 08:39 PM
Replies: 4
Views: 1,690
Posted By Genohub
A nicely written summary of Dovetail and 10X...

A nicely written summary of Dovetail and 10X Genomics: http://omicsomics.blogspot.com/2015/03/a-dovetail-route-to-scaffolded-genomes.html#more
Forum: Epigenetics 03-24-2015, 08:23 PM
Replies: 26
Views: 8,951
Posted By Genohub
Methyl-DNA Sequencing

We've posted several different flavors of Methyl-DNA sequencing (http://blog.genohub.com/top-10-sequencing-based-approaches-for-interrogating-the-epigenome/). Use the links at the end of the post to...
Forum: General 02-27-2015, 09:22 PM
Replies: 4
Views: 1,690
Posted By Genohub
AGBT 2015 Day 3

Adding summary of Day 3 at AGBT (http://blog.genohub.com/agbt-2015-summary-of-day-3/). Anyone attend the genomic medicine or transcriptomic concurrent sessions today?
Forum: General 02-26-2015, 10:03 PM
Replies: 4
Views: 1,690
Posted By Genohub
Agbt 2015

Summary of day 1 (http://blog.genohub.com/agbt-2015-summary-of-day-1/) and day 2 (http://blog.genohub.com/agbt-2015-summary-of-day-2/) of the 2015 Advances in Genome Biology and Technology Conference.
Forum: Illumina/Solexa 01-27-2015, 07:53 PM
Replies: 53
Views: 45,460
Posted By Genohub
Looks like most of the points on the latest...

Looks like most of the points on the latest Illumina tech have been covered in this thread. A few others points that I haven't seen covered yet:

- HiSeq 3000 will cost around the same as HiSeq...
Forum: Core Facilities 01-21-2015, 07:27 PM
Replies: 4
Views: 2,560
Posted By Genohub
Hi Per, Through Genohub...

Hi Per,

Through Genohub (https://www.genohub.com), 1-4, 6 are possible from your wish list. While Genohub is not an open source option, you can list services in a tiered fashion allowing users...
Forum: Sample Prep / Library Generation 01-21-2015, 06:34 PM
Replies: 9
Views: 11,545
Posted By Genohub
Yes, you can use those libraries for sequencing....

Yes, you can use those libraries for sequencing. It likely doesn't need to be part of your standard procedure. The HMW bands tend to appear with over amplification or when there is a depletion of PCR...
Forum: Illumina/Solexa 01-13-2015, 08:35 PM
Replies: 53
Views: 45,460
Posted By Genohub
"The 3000 is to the 4000 as the 1000 was to the...

"The 3000 is to the 4000 as the 1000 was to the 2000 and the 1500 to the 2500" Nice summary here: https://biomickwatson.wordpress.com/2015/01/12/putting-the-hiseq-4000-in-context/

- Genohub...
Showing results 1 to 25 of 210

 


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