SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 5 of 5
Search took 0.00 seconds.
Search: Posts Made By: HongxiangZheng
Forum: Bioinformatics 12-14-2010, 07:21 PM
Replies: 1
Views: 3,784
Posted By HongxiangZheng
It seems solved.For those reads mapped off the...

It seems solved.For those reads mapped off the end of the contig might cause the problem.

New version of GATK would solved it.
Thank Erik Banks @http://getsatisfaction.com/gsa/.
Forum: Bioinformatics 12-14-2010, 03:25 AM
Replies: 1
Views: 3,784
Posted By HongxiangZheng
GATK IndelRealigner Error:Code Exception

Hi, all

Sorry to interrupt again.

I did some work on Local realignment around indels and followed the steps online.

The step 1 was ok.When I ran the 2nd command,An error appeared.
#####...
Forum: Bioinformatics 12-14-2010, 12:24 AM
Replies: 3
Views: 2,789
Posted By HongxiangZheng
Hi, the problem was solved by just download the...

Hi, the problem was solved by just download the offical reference sequences.
Thanks all.
Forum: Bioinformatics 12-12-2010, 05:28 PM
Replies: 3
Views: 2,789
Posted By HongxiangZheng
Help!Error: the contig index is greater then the stored sequence count

Hi all

I have encountered the same problem as this http://seqanswers.com/forums/showthread.php?t=6937

Fowllowing the instruction on Local realignment around indels, I was able to go though the...
Forum: Bioinformatics 12-12-2010, 08:47 AM
Replies: 1
Views: 3,612
Posted By HongxiangZheng
Help!Error: the contig index is greater then the stored sequence count

I have encountered the same problem above.
Fowllowing the instruction on Local realignment around indels, I was able to go though the first step. However, the second step has some errors.
In...
Showing results 1 to 5 of 5

 


All times are GMT -8. The time now is 01:52 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO