Forum: Bioinformatics
12-23-2014, 03:59 AM
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Replies: 2
Views: 2,402
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Forum: Bioinformatics
12-22-2014, 03:54 AM
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Replies: 2
Views: 2,402
Blast2go pipeline
dear all,
I have two questions about blast2go.
1. Is the blast2go pipeline(b2g4pipe) still free to use. Because I checked the website of Blast2Go. The command line version need to buy. Are...
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Forum: Bioinformatics
09-18-2014, 01:08 AM
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Replies: 2
Views: 1,123
Thank you.
If I just do the following:
...
Thank you.
If I just do the following:
samtools mpileup -ugf my.fasta my.bam
the result is like what I posted before. Nothing more.
I will try to post bam file to samtools-help email...
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Forum: Bioinformatics
09-17-2014, 02:27 PM
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Replies: 2
Views: 1,123
Samtools call variant
Hi,
I used samtools to call variant. I use the latest version 1.0. First, I have to generate bcf file. I run the following command.
samtools mpileup -t DP -ugf my.fasta my.bam
the result is...
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Forum: Bioinformatics
08-29-2014, 02:05 AM
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Replies: 0
Views: 1,370
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