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Search: Posts Made By: Sanchari
Forum: General 05-21-2010, 12:11 AM
Replies: 8
Views: 3,942
Posted By Sanchari
yea...ok....I'll have to write some scripts to...

yea...ok....I'll have to write some scripts to map the annotation data to the wig file..
Forum: General 05-20-2010, 11:45 PM
Replies: 8
Views: 3,942
Posted By Sanchari
Yea...ur right..I need the gene names having...

Yea...ur right..I need the gene names having significant peaks...
Forum: General 05-20-2010, 08:52 PM
Replies: 8
Views: 3,942
Posted By Sanchari
UCSC will show the peaks for histone...

UCSC will show the peaks for histone modifications for sure....but I wanted to know the specific list of genes whose promoters are having those modifications.....my wig file contains a huge number of...
Forum: General 05-10-2010, 11:01 PM
Replies: 8
Views: 3,942
Posted By Sanchari
Thanks for the link. I have pasted the first few...

Thanks for the link. I have pasted the first few entries in the wig file and this is how it looks. I viewed it in the UCSC genome browser. I am confused regarding the cut off I should be taking...do...
Forum: General 05-10-2010, 05:16 AM
Replies: 8
Views: 3,942
Posted By Sanchari
Wig File Formats

Hello,
I am having problems regarding wig files. I wanted to know the names/accession numbers of genes having certain histone modifications. Most papers are genome wide having chip-on-chip...
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