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Forum: Bioinformatics 10-25-2017, 06:01 AM
Replies: 2
Views: 1,664
Posted By DMNO
Thank you very much, Michael! The output of...

Thank you very much, Michael!

The output of infer_experiment.py is:


Fraction of reads failed to determine: 0.0098
Fraction of reads explained by "1++,1--,2+-,2-+": 0.0089
Fraction of reads...
Forum: Bioinformatics 10-24-2017, 06:48 PM
Replies: 2
Views: 1,664
Posted By DMNO
"Stranded" data may actually be unstranded?

Hello!

I have some paired-end RNA-seq data that I was told were "stranded", but nothing about whether it's RF or FR.

I aligned some randomly sampled pairs of reads to the reference genome of...
Forum: Bioinformatics 09-09-2017, 08:14 AM
Replies: 0
Views: 762
Posted By DMNO
Bayesian network analysis to infer gene regulatory relationships

Hello!
I am currently using RNA-seq to examine the roles of a few key proteins in the transcriptional response underlying a certain condition. I came across this interesting article...
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