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Forum: Bioinformatics 10-07-2013, 02:07 PM
Replies: 5
Views: 2,669
Posted By marct
I am joining this project somewhat in the middle...

I am joining this project somewhat in the middle of the process.

From my understanding, the initial Maker run was ab initio only, we do not have ESTs or RNA-seq data to add to the pipeline. So...
Forum: Bioinformatics 10-07-2013, 09:48 AM
Replies: 5
Views: 2,669
Posted By marct
Thanks for the reply. As of this moment I am...

Thanks for the reply. As of this moment I am running genBlast and exonerate as well as the tblastn. In all of these cases, I am using the protein database of the model species as the query and my...
Forum: Bioinformatics 10-02-2013, 03:58 PM
Replies: 5
Views: 2,669
Posted By marct
Genome Annotation Pipeline Help Required

First post as a user here, so please go easy on me for lack of due diligence :o

We have a genome assembled from Illumina data. There is a reference genome of a closely related species (same...
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