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Forum: Bioinformatics 12-11-2014, 09:57 AM
Replies: 5
Views: 2,306
Posted By skbrimer
Hi Peter, I just waned to say that I feel...

Hi Peter,

I just waned to say that I feel this will work. I am having issues with the implementation of using both the BLAST tool and Biopython, however your suggestion to use the BLAST+ tool is...
Forum: Bioinformatics 12-03-2014, 05:38 AM
Replies: 5
Views: 2,306
Posted By skbrimer
Thank you Peter! I will work on getting this...

Thank you Peter!

I will work on getting this implimented. Since I do not have the command line BLAST tool on my machine... well right now at least, that is easy to fix. I will install it and see...
Forum: Bioinformatics 12-02-2014, 11:39 AM
Replies: 5
Views: 2,306
Posted By skbrimer
Thanks for the advice Peter, To be able to...

Thanks for the advice Peter,

To be able to do this would I find the documentation in Biopython or in NCBI? I ask because the output says I'm using the the current BLAST (2.2.30+) however in the...
Forum: Bioinformatics 12-02-2014, 10:38 AM
Replies: 5
Views: 2,306
Posted By skbrimer
Biopython blast parsing

Hello all,

I am currently trying to automate some of the work that I do for some in-house dsRNA viral sequencing. I'm pretty new to this but instead of re-inventing the wheel I'm using Biopython...
Showing results 1 to 4 of 4

 


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