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Forum: Bioinformatics 12-05-2013, 06:18 AM
Replies: 3
Views: 2,476
Posted By johanneskoester
Hi, sure. The solution you provide runs a for...

Hi,
sure. The solution you provide runs a for loop and spawns a bash job for each fastq.
So, they will execute in parallel, all fine.
When using Snakemake, you would have a similar effect at first...
Forum: Bioinformatics 12-05-2013, 02:24 AM
Replies: 3
Views: 2,476
Posted By johanneskoester
A new release of the Snakemake workflow system

Hi guys,
I would like to announce version 2.4.8 of Snakemake.
Snakemake is a pythonic text-based workflow system with a clean and easy to read language for defining your workflows. Snakemake is...
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