Forum: Bioinformatics
12-08-2016, 08:16 AM
|
|
Replies: 3
Views: 2,729
|
|
Forum: Bioinformatics
12-08-2016, 06:33 AM
|
|
Replies: 13
Views: 9,238
A laptop wouldn't be suitable for most of the...
A laptop wouldn't be suitable for most of the bioinformatic task. It doesn't have the power to do complex and intensive calculations. Therefor, ssh to a cluster is the way to go.
As for the OS, I...
|
|
Forum: Bioinformatics
06-10-2014, 09:19 AM
|
|
Replies: 1
Views: 3,517
|
|
Forum: Bioinformatics
12-12-2013, 05:32 AM
|
|
Replies: 5
Views: 4,265
Thanks for the idea. Here is the result:
If I...
Thanks for the idea. Here is the result:
If I use the same value for db_size for different blast-db, I get same evalues.
Now is the problem partially solved. :) Next time, I will set at the...
|
|
Forum: Bioinformatics
12-12-2013, 12:45 AM
|
|
Replies: 5
Views: 4,265
Thank you rhinoceros for helping.
But I...
Thank you rhinoceros for helping.
But I already read that post and tried the cumulative length. In my example they are 13581 aminoacids in all 33 sequences. And with try and error I found that the...
|
|
Forum: Bioinformatics
12-11-2013, 08:56 AM
|
|
Replies: 5
Views: 4,265
BLASTp parameter -dbsize problems (blastall -z)
Hello all,
I'm stuck at a blastp problem. I want to use the parameter -dbsize to incrementally add sequences to a blast output. Same option is available in blastall with the parameter -z.
I did...
|
|
Forum: Bioinformatics
10-02-2013, 09:43 AM
|
|
Replies: 25
Views: 20,986
|
|
Forum: Bioinformatics
08-19-2013, 08:13 AM
|
|
Replies: 2
Views: 1,871
|
|
Forum: Bioinformatics
08-19-2013, 07:53 AM
|
|
Replies: 2
Views: 1,871
|
|
Forum: Bioinformatics
07-29-2013, 05:22 AM
|
|
Replies: 1
Views: 1,899
|
