Forum: Bioinformatics
09-08-2014, 02:02 PM
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Replies: 648
Views: 191,006
Hi Andrew and Felix,
Sorry for this late...
Hi Andrew and Felix,
Sorry for this late message.
Thanks Andrew for your reply to my question regarding M-bias.
I effectively ran the Extractor with the --no_overlap option on before. As...
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Forum: Bioinformatics
08-22-2014, 04:21 PM
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Replies: 648
Views: 191,006
M-bias: CHH and CHG total calls drop off in Read2
Hi Everyone,
I have questions regarding M-bias plot and CHH,CHG methylation calls generated with bismark. I hope it is the right thread to ask otherwise let me know where should have I posted it....
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Forum: Bioinformatics
03-12-2012, 10:24 AM
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Replies: 5
Views: 3,409
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Forum: Bioinformatics
03-11-2012, 11:47 PM
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Replies: 5
Views: 3,409
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Forum: Bioinformatics
03-11-2012, 11:45 PM
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Replies: 5
Views: 3,409
Hi loyal Goff,
I have been trying running...
Hi loyal Goff,
I have been trying running CummeRbund. As suggested I installed the latest version of cummeRbund (v1.1.3) within R 2.15.0 . The Error << Error in data.frame(index =...
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Forum: Literature Watch
02-02-2012, 09:57 AM
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Replies: 25
Views: 8,939
Hi Stefano,
Thanks for the CNAnorm Package.
...
Hi Stefano,
Thanks for the CNAnorm Package.
As PeakPloidy is really computationally time consuming, is there a way to run it as a parallel job (multithreading) using an R package such as "snow" ...
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Forum: Bioinformatics
03-30-2011, 08:04 PM
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Replies: 25
Views: 14,209
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