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Forum: Bioinformatics 12-09-2015, 06:42 AM
Replies: 1
Views: 1,634
Posted By nataliesilmon
Post Next gen sequencing analysis - for small genomes


I am working on an organism with a small genome (Toxoplasma gondii, 65 Mbp). With ChIP-seq, we naturally tend to get very high sequence coverage compared to human/mouse/organisms with large...
Forum: Bioinformatics 12-08-2015, 09:36 AM
Replies: 0
Views: 1,613
Posted By nataliesilmon
Angry SPP ChIP-seq peak caller installation problems


I am trying to install SPP version 1.10.1 (mac OS 10.9.5, R 3.3.2, Boost 1.55) and am having some problems. I also tried SPP version 1.11 and get the same problem but can't work out what the...
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