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Forum: RNA Sequencing 07-17-2018, 07:20 PM
Replies: 0
Views: 553
Posted By Sealzad
Question Understanding sailfish-cir results

Hi, I have a problem trying to understand/interpret the results of the sailfish-cir. I went through the manual and article a few times, but I still don't fully grasp the interpretation of it.
...
Forum: Bioinformatics 07-14-2018, 05:51 AM
Replies: 0
Views: 504
Posted By Sealzad
Question Understanding sailfish-cir results

Hi, I have a problem trying to understand/interpret the results of the sailfish-cir. I went through the manual and article a few times, but I still don't fully grasp the interpretation of it.
...
Forum: Bioinformatics 06-28-2018, 06:13 PM
Replies: 0
Views: 410
Posted By Sealzad
Advice on using sailfish-cir's output to justify circular RNA (circRNA)

Hi,

I have a problem trying to focus on a specific gene to study for circRNA.

In my work, I have both control and diseased condition. I generated circRNA from circular RNA identifier (CIRI2) as...
Forum: Bioinformatics 05-21-2018, 07:19 PM
Replies: 0
Views: 219
Posted By Sealzad
About CIRI's output

Hi,

I tried finding information on CIRI's output details, but there is little to go around. Could someone help me with the interpretation?

1) So in the column heading, CIRI's output has the...
Forum: De novo discovery 04-05-2018, 07:31 AM
Replies: 0
Views: 2,575
Posted By Sealzad
Mapsplice

Hi,

I am very new to Mapsplice2.0 and would need help interpreting the results for circular RNA output.

Could someone give me an easy to understand crash course of how I should go about with...
Forum: RNA Sequencing 04-04-2018, 10:58 AM
Replies: 1
Views: 885
Posted By Sealzad
Inconsistent RNAseq data in knockdown expt

Hi,

I am helping a colleague to conduct a differential expression analysis with RNAseq data but I have some concerns about the expression levels stated in the analysis. Based on the design of the...
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