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Forum: Bioinformatics 04-29-2018, 07:56 AM
Replies: 1
Views: 2,062
Posted By s18692001
Question BBSplit result statistics

I use to run my analysis as following:
./bbmap/ in1=R1_001_bc_prefix.fastq.gz in2=R2_001_bc_prefix.fastq.gz ref=hg19.fa,mm10.fa basename=out_%.bam threads=4 ambig2=best

Forum: Bioinformatics 05-30-2017, 07:31 AM
Replies: 1
Views: 1,146
Posted By s18692001
Cummerbund Volcano plot infinite value

I'm faced with a problem in the volcano plot of CummeRbund. As shown in enclosed file, you could see that there are plenty of infinite dots on the borders and also on the bottom. Is there any method...
Forum: Bioinformatics 04-13-2017, 08:01 PM
Replies: 0
Views: 2,840
Posted By s18692001
Question Error Issue of DiffBind (Deseq2) R package

The following objects are masked from 'package:base':

Filter, Find, Map, Position, Reduce, anyDuplicated, append,, cbind, colnames,, duplicated, eval, evalq,
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