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Forum: Bioinformatics 03-16-2012, 08:26 AM
Replies: 1
Views: 1,145
Posted By ps376
I am interested in this as well. Does anybody...

I am interested in this as well. Does anybody have experience with this?
Forum: 454 Pyrosequencing 10-13-2011, 01:33 PM
Replies: 2
Views: 4,925
Posted By ps376
454 paired-end or single-end?

Hi,

We have recently received 454 targeted sequencing data, and I am having trouble finding if the data is paired-end or single-end. Where can I find this information? I am looking to detect...
Forum: Bioinformatics 10-08-2011, 04:56 AM
Replies: 3
Views: 3,394
Posted By ps376
Exclamation CNVer

Hi,

Thanks for the replies! I found CNVer on the wiki. They claim to work with low-depth targeted sequencing kind of data (454) and use paired end information rather than depth of coverage.
...
Forum: Bioinformatics 10-06-2011, 11:59 AM
Replies: 3
Views: 3,394
Posted By ps376
Copy number analysis using 454 data

Hi,

I am pretty new to sequence analysis in general, but I was wondering if anyone know how to identify amplifications and deletions from 454 sequencing data? Intuitively, I would feel the...
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