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Forum: Bioinformatics 08-26-2015, 05:36 AM
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Views: 2,883
Posted By Genomics101
Can't run GATK HaplotypeCaller set ploidy = 1

Greetings!

I have been attempting to call variants on a haploid genome using GATK HaplotypeCaller, however when I set ploidy = 1, I get an error:

INFO 21:05:57,644 HelpFormatter -...
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