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Forum: Bioinformatics 05-28-2010, 07:03 PM
Replies: 1
Views: 3,955
Posted By aiden
Bfast output and "Empty Sequence Dictionary" in .sam output

Hi there,
I've recently been struggling with the .sam output file from BFAST postprocess. My goal is to get this output into a .ace format. Anthony Fejes recently tweaked the ConvertToAce utility...
Forum: Bioinformatics 05-27-2010, 07:10 PM
Replies: 3
Views: 7,535
Posted By aiden
Thanks for the very helpful replies, much...

Thanks for the very helpful replies, much appreciated.
Forum: Bioinformatics 05-27-2010, 12:57 AM
Replies: 3
Views: 7,535
Posted By aiden
SAM flag field and removing unmapped reads from BFAST output

Hi there,

I'm using BFAST to align Solexa reads to a very small portion of a genome (~3kb), and have been considering the best way to remove unmapped reads from the output since these...
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