Forum: Bioinformatics
12-13-2012, 08:42 AM
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Replies: 37
Views: 88,734
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Forum: Bioinformatics
12-12-2012, 03:58 PM
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Replies: 37
Views: 88,734
Hi Laura,
I am still having trouble with...
Hi Laura,
I am still having trouble with extracting the variant calls of a specific sample.
As you pointed out earlier that I have downloaded sites file with no genotype column, so now I got...
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Forum: Bioinformatics
12-07-2012, 12:36 PM
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Replies: 37
Views: 88,734
Laura,
I tried with downloading both the...
Laura,
I tried with downloading both the vcf.gz and tbi files. but it did not work and it is difficult to interpret the error. can you see what I am doing wrong here
./tabix -h...
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Forum: Bioinformatics
12-06-2012, 05:37 PM
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Replies: 37
Views: 88,734
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Forum: Bioinformatics
12-06-2012, 10:35 AM
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Replies: 37
Views: 88,734
Laura,
Thanks much for your reply. I am...
Laura,
Thanks much for your reply. I am guessing this is the example for getting the vcf of sample.
tabix -h ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/release/20100804/ALL.2of4in......
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Forum: Bioinformatics
12-05-2012, 03:18 PM
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Replies: 37
Views: 88,734
vcf file of specific sample from 1000Genome data
Hi,
Can anyone help me how to access the vcf file of a specific sample from 1000Genome data. I found the consensus file at (ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/release) but couldn't find...
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