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Search: Posts Made By: ycl6
Forum: Bioinformatics 06-30-2016, 04:00 PM
Replies: 98
Views: 26,208
Posted By ycl6
Hi gringer, thanks, I didn't realize the multiple...

Hi gringer, thanks, I didn't realize the multiple fastq files wasn't concatenated properly before inputting them to tadpole. I'll fix it and try again.
Forum: Bioinformatics 06-30-2016, 12:37 AM
Replies: 98
Views: 26,208
Posted By ycl6
Hi, I am using tadpole from BBMap v36.11 and...

Hi, I am using tadpole from BBMap v36.11 and received some java error messages. The command I used is:

tadpole.sh -Xmx1000g in1=read1.corrected.fq.gz in2=read2.corrected.fq.gz out=contigs.fa.gz
...
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