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Forum: Bioinformatics 03-11-2012, 10:28 AM
Replies: 3
Views: 2,618
Posted By ysaletore
Yes, this is for a form of IP. So I'm trying to...

Yes, this is for a form of IP. So I'm trying to gauge the enrichment of the IP over the control in a given window. I've heard that RPKK is apparently not a good measure anymore, and that length...
Forum: Bioinformatics 03-08-2012, 03:03 PM
Replies: 3
Views: 2,618
Posted By ysaletore
Computing Enrichment and RPKM

I'm conducting analysis of RNA HiSeq data, and we are trying to compute enrichment for a given window of reads in the IP over reads in our control. This window could be an entire gene, or a very...
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