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Forum: Bioinformatics 01-19-2017, 11:27 AM
Replies: 7
Views: 3,025
Posted By hamcan
that makes perfect sense!!! Thank you so much

that makes perfect sense!!! Thank you so much
Forum: Bioinformatics 01-19-2017, 09:25 AM
Replies: 7
Views: 3,025
Posted By hamcan
First step I'm doing is using Trimmomatic to trim...

First step I'm doing is using Trimmomatic to trim and remove my adapters using the PE setting:

java -jar trimmomatic-0.36.jar PE File1_L001_R1_001.fastq File1_L001_R2_001.fastq...
Forum: Bioinformatics 01-18-2017, 01:10 PM
Replies: 7
Views: 3,025
Posted By hamcan
i know i should expect a decrease but i'm getting...

i know i should expect a decrease but i'm getting an increase. do you know why?
Forum: Bioinformatics 01-18-2017, 10:11 AM
Replies: 7
Views: 3,025
Posted By hamcan
Number of Reads Increasing

Hi there,
I trimmed my reads and then merged them using FLASh. However, I found that the number of reads before processing (trim and merge) is lower than the number of reads after processing.
Is...
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