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Forum: Bioinformatics 02-12-2014, 01:40 AM
Replies: 9
Views: 2,686
Posted By susanklein
hey, thanks. yes I thought I'd need to convert it...

hey, thanks. yes I thought I'd need to convert it but that prob means doing the assembly again and I'll have to fish out the paired and unpaired reads (mixed in the. sff) But I'll get around to it....
Forum: Bioinformatics 02-10-2014, 10:11 PM
Replies: 9
Views: 2,686
Posted By susanklein
Thanks Sven, I followed the consed docs on...

Thanks Sven, I followed the consed docs on installation and wasted a day in the attempt.. error after error.. so don't have time for it. Need results. I'll try the other progs.
Thx again.
S.
Forum: Bioinformatics 02-10-2014, 11:12 AM
Replies: 9
Views: 2,686
Posted By susanklein
Hi, I tried Eagle, Consed (couldn't...

Hi,

I tried Eagle, Consed (couldn't install), Tablet, Magicviewer. Tablet does show the orietation of each paired read.. The more I think about it, that should be enough, but it would be nice to...
Forum: Bioinformatics 02-10-2014, 04:13 AM
Replies: 9
Views: 2,686
Posted By susanklein
454 ACE assembly with paired reads... how to view?

Hi,

I'm new here, thanks in advance for any help.

I have a 454 dataset of 'allcontigs.ace'. The reads consist of paired and unpaired. If I use a viewer like Tablet, which I find very good.. I...
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