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Forum: Bioinformatics 03-14-2016, 04:34 AM
Replies: 4
Views: 1,817
Posted By standonn
Thank you for your answer! I actually was able...

Thank you for your answer!
I actually was able to run Mash and then input the distance matrix into ape to build a phylogenetic tree (and get it in Newick format)! It worked very good and the...
Forum: Bioinformatics 03-11-2016, 04:51 AM
Replies: 4
Views: 1,817
Posted By standonn
Thanks for your answer! Mash seems like a very...

Thanks for your answer! Mash seems like a very interesting tool indeed! I wonder if it wouldn't be possible to get a newick tree from it...
I'll be studying it!
Forum: Bioinformatics 03-11-2016, 01:36 AM
Replies: 4
Views: 1,817
Posted By standonn
Phylogeny using whole proteomes

Dear all,

I have the proteome (and genome) of several species of nematodes. I would like to build the phylogeny of these species. Ultimately I would like a newick tree (which I could use as an...
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