SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 3 of 3
Search took 0.01 seconds.
Search: Posts Made By: seversond12
Forum: Bioinformatics 02-16-2015, 04:42 AM
Replies: 2
Views: 2,596
Posted By seversond12
Salmon and RSEM TPM estimate divergence?

Hello,

I have been exploring which transcript quantification method to use for isoform level analysis. To date I have been performing gene level analysis with a STAR-htseqcounts-edgeR pipeline....
Forum: General 09-18-2014, 02:52 AM
Replies: 1
Views: 786
Posted By seversond12
EBV Genomes

Currently, I'm using the NCBI taxonomy and NCBI genomes that are tied to it to analyse pathogen genomes and reads in human samples. I am particularly interested in looking at EBV (Human herpesvirus...
Forum: Bioinformatics 09-18-2014, 02:44 AM
Replies: 2
Views: 1,597
Posted By seversond12
NCBI GTF for Pathogens

I am attempting to design software for pulling out pathogen reads from either RNA-seq or WGS sequencing of human samples. The pipeline is centred around the NCBI taxonomy database and NCBI pathogen...
Showing results 1 to 3 of 3

 


All times are GMT -8. The time now is 12:51 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO