Forum: Bioinformatics
12-07-2012, 07:46 AM
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Replies: 37
Views: 88,829
there is another paper with 113 pages,...
there is another paper with 113 pages, "supplemental information"
http://www.nature.com/nature/journal/v491/n7422/extref/nature11632-s1.pdf
with a referrence:
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38!...
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Forum: Bioinformatics
12-05-2012, 11:38 AM
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Replies: 37
Views: 88,829
wait, I have a better idea.
You compute the...
wait, I have a better idea.
You compute the genetical distance between any pair of two samples, 1092^2 integers,4MB.
Just the number of set bits in the logical xor of the two 37M-bit-vectors.
Then...
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Forum: Bioinformatics
12-05-2012, 11:07 AM
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Replies: 37
Views: 88,829
no Y-chromosome ?
how would I pack the data...
no Y-chromosome ?
how would I pack the data ?
I want the 1092*36.7M SNPs in 23 binary files, one per chromosome.
Bit i in chromosome j in file(sample) k should be set, iff that SNP is present....
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Forum: Bioinformatics
12-05-2012, 08:37 AM
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Replies: 37
Views: 88,829
thanks.
10 pages the paper (pdf) ......
thanks.
10 pages the paper (pdf) ... printing...
2 pages the readme
that will keep me busy for a while ...
well, I'll probably only read and understand parts of it
I know, there is also the...
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Forum: Bioinformatics
12-05-2012, 07:55 AM
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Replies: 37
Views: 88,829
I don't know yet.
Probably compare them,...
I don't know yet.
Probably compare them, #mutations,distances
calculate the consensus,ancestor, plot the distances,
make my cloud-graphics(plot amino acid mutations over nucleotide mutations),
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Forum: Bioinformatics
12-05-2012, 07:46 AM
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Replies: 37
Views: 88,829
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