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Forum: SOLiD 12-09-2013, 01:36 AM
Replies: 0
Views: 4,787
Posted By BambooGarden
SHRiMP mapping qualities

Hello everyone,

I aligned SOLiD reads to a reference genome using SHRiMP2 and I am
looking at the alignment in IGV.

What I find weird is that either the reads have a mapping score of 250 (even...
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