Forum: Bioinformatics
10-18-2020, 11:06 PM
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Replies: 0
Views: 755
MEGA software
Hello,
is it possible to colorize entire phylogenetic tree clusters with MEGAX? I only found option for changing color of the branch
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Forum: Bioinformatics
09-01-2020, 08:33 AM
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Replies: 1
Views: 853
Samtools is not working
Hello,
I wrote a script for obtaining bam files, however it looks like it is not understanding flags given. I wrote a flag for no header - bS but still keep getting errors. I already feel desperated...
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Forum: Bioinformatics
09-01-2020, 04:52 AM
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Replies: 4
Views: 938
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Forum: Bioinformatics
09-01-2020, 02:27 AM
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Replies: 4
Views: 938
guzip paired fast.gz files
Hello,
I have a bunch of paired fastq.gz files, and I need to decompress them for further low quality data trimming.
However gunzip command is not working on paired files. Any suggestions?
this...
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Forum: Bioinformatics
08-24-2020, 02:20 PM
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Replies: 1
Views: 944
Segmentation fault in samtools
I am trying to generate BAM files, however there is some error with reference indexing.
[samfaipath] build FASTA index...
[E::fai_build_core] Format error, unexpected "N" at line 1
[samfaipath]...
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Forum: Bioinformatics
08-24-2020, 11:32 AM
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Replies: 1
Views: 928
bwa alignement
Hello,
I am trying to align viral RNA sequences against reference fasta file.
It looks like it is not working properly
my index code looks like that
./bwa index reference.fasta
but I keep...
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