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Forum: Bioinformatics 02-11-2011, 07:36 AM
Replies: 3
Views: 3,082
Posted By dg.pooja
Different versions of samtools-pileup

Hello,

** I have used pileup function with -vcf options both with samtools versions 0.1.7a and 0.1.12a

** I found the pileup output from both versions of samtools to be very different.

**...
Forum: General 01-31-2011, 05:53 PM
Replies: 1
Views: 1,891
Posted By dg.pooja
Bfast localalign error

I am Pooja working as an intern in Ganit labs in Bangalore, on NGS .

I was trying to run bfast for paired end alignment using bfast (bfast+bwa-0.6.4e) and I am getting the following error in the...
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