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Forum: Bioinformatics 04-01-2013, 06:15 AM
Replies: 35
Views: 14,321
Posted By kristofit
Dear Timothy Thank you very much for your...

Dear Timothy

Thank you very much for your answer and help. I have used the the newest version of preseq (maybe it could be named v1.1). It's great that paired-end data can now be used (option...
Forum: Bioinformatics 03-29-2013, 04:03 AM
Replies: 35
Views: 14,321
Posted By kristofit
Dear Timothy Thank you for your developing...

Dear Timothy

Thank you for your developing the method and for implementing and sharing the tool. It is a great opportunity to assess the libraries complexity and to have a statistical support to...
Forum: RNA Sequencing 11-07-2012, 11:37 PM
Replies: 6
Views: 2,529
Posted By kristofit
Hi, I got the same problem using tophat...

Hi,

I got the same problem using tophat 2.0.6. (and bowtie 2.0.2) and can not find a way to solve the problem.
- error log is:
Error running /PATH/tophat.dir/bin/tophat_reports
Error: CIGAR...
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