Forum: Epigenetics
03-25-2011, 07:38 PM
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Replies: 6
Views: 2,329
Was looking through Ernst et al today from the...
Was looking through Ernst et al today from the recent issue of Nature and saw the chromatin state table in Fig 1b and knew I had finally found what I was searching for...
The style of the table...
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Forum: Epigenetics
03-15-2011, 12:45 PM
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Replies: 6
Views: 2,329
combinatorial histone methylation patterns
There was a paper in the past few years that looked at dozens of distinct histone modifications (methylations & acetylations) in a mammalian cell type by ChIP-Seq, then defined some of the most...
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Forum: General
08-12-2010, 08:18 AM
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Replies: 0
Views: 2,207
ENCODE rules?
This was in the figure legend of paper from the Bresnick & Farnham groups [http://www.ncbi.nlm.nih.gov/pubmed/19941826]. Does anybody know where documentation of this rule (and others like it) might...
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Forum: General
08-11-2009, 11:35 AM
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Replies: 0
Views: 3,653
ChIP-Seq Biological Replicates
How are people handling biological replicates in ChIP-Seq experiments?
I recognize the benefit of analyzing replicates independently, but what is the "best" way to then combine this data and end...
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