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Search: Posts Made By: JonB
Forum: Bioinformatics 11-26-2013, 02:38 AM
Replies: 7
Views: 7,914
Posted By JonB
And now I just realized there's a bioconductor...

And now I just realized there's a bioconductor mailing list which is probably where this question belong ;)
Forum: Bioinformatics 11-26-2013, 02:18 AM
Replies: 7
Views: 7,914
Posted By JonB
Sorry for spamming you with questions... I...

Sorry for spamming you with questions...

I am able to convert the read counts by voom(), but I have trouble getting the experiment design correct using model.matrix()

I have 18 libraries...
Forum: Bioinformatics 11-25-2013, 06:29 AM
Replies: 7
Views: 7,914
Posted By JonB
Ok, thanks!

Ok, thanks!
Forum: Bioinformatics 11-25-2013, 05:34 AM
Replies: 7
Views: 7,914
Posted By JonB
Can I test for differential expression using FPKM values?

Hi,

I know this subject has been discussed in many posts, and I am sorry if I am double posting.

I have a matrix of gene expression counts and the values are FPKM.
I don't have the sam files....
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