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Forum: Bioinformatics 11-03-2010, 07:03 PM
Replies: 0
Views: 1,859
Posted By boyzoe
how to calculate ka/ks with RNA-seq data

Hi!
As I got some 454 RNA-seq data and i need to calculate ka/ks of all the genes.
These sequences include coding and non-coding regions. Any there any methods to calculate ka/ks smoothly? Do i...
Forum: Bioinformatics 08-23-2010, 05:26 PM
Replies: 33
Views: 16,863
Posted By boyzoe
Thumbs up Really thanks, maubp. The problem solved~!

Really thanks, maubp. The problem solved~!
Forum: Bioinformatics 08-22-2010, 06:57 PM
Replies: 33
Views: 16,863
Posted By boyzoe
Actually, I couldn't install in ubuntu. After...

Actually, I couldn't install in ubuntu. After extraction, I could see the files (read me, ssaha2, ssaha2build, ssaha snp). However, after put the command into terminal, it told me that command can't...
Forum: Bioinformatics 07-09-2010, 06:01 PM
Replies: 2
Views: 1,473
Posted By boyzoe
question about RNA-seq in hybridized animals

Hi! Guys!
I have RNA-seq data of one hybrid and its parents (father and mother). I wanna to align transcript sequences of these three samples. I don't know if there is any appropriate tools for this...
Showing results 1 to 4 of 4

 


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