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Forum: RNA Sequencing 03-27-2019, 06:16 AM
Replies: 4
Views: 1,096
Posted By sanderson83
Perfect. Thanks for the comprehensive and...

Perfect.

Thanks for the comprehensive and helpful response. Stops me wasting any more time looking into this.

Thanks,
Sanderson.
Forum: RNA Sequencing 03-26-2019, 05:42 AM
Replies: 4
Views: 1,096
Posted By sanderson83
Hi Bukowski, Thanks for your reply. If...

Hi Bukowski,

Thanks for your reply.

If we were to cluster the machines and apply a shared/distributed memory model would I likely see an increase in processing speeds due to higher...
Forum: RNA Sequencing 03-15-2019, 12:52 AM
Replies: 4
Views: 1,096
Posted By sanderson83
Denovo assembly system resources

Hi,

Hope someone can help me out with an IT/Systems question.

I currently process fastq files using Trinity for assembly and this roughly takes 4 hours per sample. I have noticed that...
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