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Forum: Bioinformatics 01-24-2016, 07:34 PM
Replies: 2
Views: 1,220
Posted By smm
i am sorry, my english is poor, thank you for...

i am sorry, my english is poor, thank you for correcting me!
Forum: Bioinformatics 01-21-2016, 07:03 PM
Replies: 2
Views: 1,220
Posted By smm
assembly cluster

hi, i met a problem, I hava two samples,the two samples are the same species, they have a similarity of 90%,the two samples are assembled by trinity respectively, I got more than 60000,50000...
Forum: Bioinformatics 01-11-2016, 06:18 PM
Replies: 4
Views: 1,114
Posted By smm
thanks SylvainL, I have read this paper, it can't...

thanks SylvainL, I have read this paper, it can't solve my problem. thanks again!
Forum: Bioinformatics 01-11-2016, 02:04 AM
Replies: 0
Views: 959
Posted By smm
circular RNA analysis or identify without reference genome

hello everybody, in general, circular RNA are identifed with reference genome. now I want to identify circular RNA without reference genome, Do you have any paper recommended? Thanks a lot!
Forum: Bioinformatics 01-10-2016, 05:27 PM
Replies: 4
Views: 1,114
Posted By smm
thanks SylvainL, I want to blast my circRNAs...

thanks SylvainL, I want to blast my circRNAs which are identified by CIRI software to circRNAs which in circBase database(http://www.circbase.org/). how can i find new circRNAs from my identified...
Forum: Bioinformatics 01-08-2016, 02:16 AM
Replies: 4
Views: 1,114
Posted By smm
new gene discovery

I am a newcomer to boinformatics. I want to blast two sequences, how can i find new genes? Do you have any method?
Forum: Bioinformatics 01-05-2016, 09:08 PM
Replies: 0
Views: 958
Posted By smm
Smile Conservation analysis of circular RNA

I used CIRI tool to identify circular. What methods should be used to analyze circular RNA Conservation?
Forum: RNA Sequencing 12-23-2015, 12:49 AM
Replies: 0
Views: 829
Posted By smm
circular RNA sequencing

I want to conjoint analysis long noncoding RNA, mRNA, miRNA with circular RNA, how can I analysis circRNA by using lncRNA sequencing method?:)
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