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Forum: Bioinformatics 02-14-2012, 12:09 AM
Replies: 147
Views: 56,547
Posted By fyusufi
Thanks for the quick reply!

Thanks for the quick reply!
Forum: Bioinformatics 02-12-2012, 09:05 PM
Replies: 147
Views: 56,547
Posted By fyusufi
Hi Kai, I was wondering if there were any...

Hi Kai,

I was wondering if there were any special parameters required while running BWA, or are the default values ok?

Also, if I have sequence libraries with different insert sizes should I...
Forum: Bioinformatics 02-08-2012, 11:59 PM
Replies: 25
Views: 20,696
Posted By fyusufi
Ah I managed to fix my problem after searching...

Ah I managed to fix my problem after searching around on google for a while.

I added in the term "-ldl" into the makefile so that it looks like this:

ROOTLIBS = -L$(ROOTSYS)/lib -ldl -lNet...
Forum: Bioinformatics 02-08-2012, 08:43 PM
Replies: 25
Views: 20,696
Posted By fyusufi
Hello, I followed the instructions given here and...

Hello, I followed the instructions given here and successfully installed root and setup the environment variables. The samtools in CNVnator_v0.2.5/src also compiled successfully.

I'm stuck at the...
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