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Search: Posts Made By: Pedro Olivares
Forum: Bioinformatics 09-17-2021, 11:28 PM
Replies: 6
Views: 1,094
Posted By Pedro Olivares
Oops, let's see what I can do. Thanks for the...

Oops, let's see what I can do. Thanks for the information, though. Any hint on how can I find his email address? So far none of the obvious places worked and I haven't heard back from him on Twitter....
Forum: Bioinformatics 09-17-2021, 04:08 AM
Replies: 6
Views: 1,094
Posted By Pedro Olivares
I think I might be hitting into some sort of bug....

I think I might be hitting into some sort of bug.

When I input a fastq using its path as an argument, the whole thing runs fine but when `cat` this same file and pipe it to `tadpole.sh` using the...
Forum: Bioinformatics 09-17-2021, 01:28 AM
Replies: 6
Views: 1,094
Posted By Pedro Olivares
Great this is exactly what I needed. I will test...

Great this is exactly what I needed. I will test and update since now the bottle neck will be to efficiently sub-set a large collection of reads. Some tabix should help. Let's see ...

Thanks again...
Forum: Bioinformatics 09-16-2021, 09:34 AM
Replies: 6
Views: 1,094
Posted By Pedro Olivares
Question Run Tadpole (BBtools) only on sub-sets of reads from input files

Hey there,

I have been using tadpole for error correction (and BBtools in general) and I am extremely happy with its results and performance. Much appreciated!

I am looking for support/advice...
Forum: Introductions 09-16-2021, 01:11 AM
Replies: 0
Views: 789
Posted By Pedro Olivares
intro and test

Hi everyone,

I am Pedro, doing some tech dev for zebrafish developmental biology. I used to have an account back in the early days but I lost access. We are back!

This message is more of a test...
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