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Forum: Bioinformatics 04-06-2018, 06:12 AM
Replies: 3
Views: 1,943
Posted By leonardo_ca
Now working! Cloned from Github Reinstalled...

Now working!

Cloned from Github Reinstalled and it is working.
git clone https://github.com/dzerbino/velvet.git
cd velvet
make ’CATEGORIES=300’ ’MAXKMERLENGTH=57’ ’OPENMP=1’
./velveth...
Forum: Bioinformatics 04-06-2018, 03:10 AM
Replies: 3
Views: 1,943
Posted By leonardo_ca
Hi mastal, thanks for replying. velveth...

Hi mastal, thanks for replying.
velveth produced the correct files: Log Roadmaps Sequences

I am installing it again to see what happens. Interestingly (maybe because of the version) there is no...
Forum: Bioinformatics 04-05-2018, 12:41 PM
Replies: 3
Views: 1,943
Posted By leonardo_ca
why I have a velvetg blank script?

Hey there,
I came across this really odd situation and have no idea about what to do. I’ve just installed Velvet-1.2.10 and realized that the “velvetg” script is actually in blank!
...
Forum: Bioinformatics 12-16-2017, 11:33 AM
Replies: 3
Views: 1,303
Posted By leonardo_ca
Dear GenoMax, thanks for replying. Good point,...

Dear GenoMax, thanks for replying.
Good point, we can make our way for get rid of low processor capacity and storing, but for RAM the only solution is buying more and more.
The lab is not exactly...
Forum: Bioinformatics 12-16-2017, 10:15 AM
Replies: 3
Views: 1,303
Posted By leonardo_ca
How to set up a computer for bioinformatics? Any hints..

Hey there,
I know this question has been around a few times, however the threads I could find are relatively not so updated and as Bioinformatics and computer evolves quite fast, I decided to ask...
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