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Forum: RNA Sequencing 05-19-2016, 02:18 AM
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Views: 1,727
Posted By KateShepard
how does cuffdiff calculate replicate FPKM values?

Hi,

I have two conditions, 5 replicates for each. After running cuffdiff I noticed the FPKM values in gene_exp.diff for one condition do not make sense.

For example, the 5 replicate FPKM...
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