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Forum: Illumina/Solexa 08-25-2012, 01:17 PM
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Posted By dnajuice
export scaffold files from SAM/BAM alignment

Using BWA, I have aligned ~10M MiSeq paired end reads to ~100 sequence contigs obtained from non-paired end 454 data. Most of the contigs remained intact after aligning the paired end data, but some...
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