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Forum: Bioinformatics 08-05-2016, 03:58 AM
Replies: 1
Views: 2,006
Posted By CLFougner
Compare mouse cancer sequence data with COSMIC database

I'm working with whole exome sequence data from a mouse breast cancer model. I've done mutation calling using the GATK best practices workflow (BWA mem (mm10) -> Picard deduplicate -> base quality...
Forum: Literature Watch 07-28-2016, 03:15 PM
Replies: 77
Views: 50,334
Posted By CLFougner
Segmentation fault (core dumped)

Hi Valeu,

I'm trying to run Control-FREEC on mouse exome sequencing data, but I've run into an issue! It works fine when I run Control-FREEC without the BAF analysis, but when I enable it I get...
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